Computation Error, with 0:00:01 elapsed time


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Aaron Finney
Volunteer tester

Joined: Mar 23 07
Posts: 74
ID: 367
Credit: 2,409,831
RAC: 0
Message 6913 - Posted 14 Oct 2012 0:14:51 UTC

____________________________

<core_client_version>7.0.28</core_client_version>
<![CDATA[
<message>
The environment is incorrect. (0xa) - exit code 10 (0xa)
</message>
<stderr_txt>
Calling BOINC init.
Starting charmm run (initial or from checkpoint)...
UNEXPECTED END OF FILE DURING READING ERROR - Probable cause: corrupted input files. Please reatach the project. Charmm exited with code 10.
Calling BOINC finish.
called boinc_finish

</stderr_txt>
]]>
_____________________________


Getting Lots of these. Are these the WU that have been canceled on your end "going through the motions?", I'm assuming so, considering the nature of the error message indicating that the input files might be blanked out. Never processed any cancelled work before to my knowledge, so.... Is that what it is or is this a new problem?

ID: 6913 | Rating: 0 | rate: Rate + / Rate - Report as offensive
Boyu Zhang
Forum moderator
Project administrator
Project developer
Project tester

Joined: May 5 10
Posts: 88
ID: 28821
Credit: 2,013,795
RAC: 0
Message 6915 - Posted 14 Oct 2012 4:19:19 UTC - in response to Message ID 6913 .

Dear Aaron,

I checked one of the error workunits from the server side: http://docking.cis.udel.edu/community/result.php?resultid=34347553, and the input file is complete and consistent on the server. Could you please try to detach and reattach to the project? This should wash out the old workunits, and start fresh. Please let me know if this helps.

Thanks,
Boyu


Getting Lots of these. Are these the WU that have been canceled on your end "going through the motions?", I'm assuming so, considering the nature of the error message indicating that the input files might be blanked out. Never processed any cancelled work before to my knowledge, so.... Is that what it is or is this a new problem?
ID: 6915 | Rating: 0 | rate: Rate + / Rate - Report as offensive
Aaron Finney
Volunteer tester

Joined: Mar 23 07
Posts: 74
ID: 367
Credit: 2,409,831
RAC: 0
Message 6926 - Posted 18 Oct 2012 17:19:14 UTC

Detach - reattach, and no problems. Thank you.

ID: 6926 | Rating: 0 | rate: Rate + / Rate - Report as offensive

Message boards : Number crunching : Computation Error, with 0:00:01 elapsed time

Database Error
: The MySQL server is running with the --read-only option so it cannot execute this statement 
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query: update docking.thread set views=views+1 where id=696