<?xml version="1.0" encoding="ISO-8859-1" ?>
    <rss version="2.0">
    <channel>
    <title>Docking@Home</title>
    <link>http://docking.cis.udel.edu/</link>
    <description>BOINC project Docking@Home: Main page News</description>
    <copyright>University of Delaware</copyright>
    <lastBuildDate>Tue, 02 Feb 2010 21:44:17 GMT</lastBuildDate>
    <language>en-us</language>
    <image>
        <url>http://docking.cis.udel.edu/images/icons/dh_icon_32.png</url>
        <title>Docking@Home</title>
        <link>http://docking.cis.udel.edu/</link>
    </image>
<item>
	<title>D@H starts crossdocking</title>
	<link>http://docking.cis.udel.edu/about/project/news.php#236</link>
	<guid isPermaLink="true">http://docking.cis.udel.edu/about/project/news.php#236</guid>
	<description><![CDATA[This week Docking@Home starts its crossdocking phase, we will perform docking of a given ligand with slightly different conformations of the receptor, then our postprocessing algorithm will select the best ligand conformation. This process simulates the flexibility of the protein resulting in more realistic simulations]]></description>
	<pubDate>Tue, 02 Feb 2010 21:18:00 GMT</pubDate>
</item>
<item>
	<title>Project News Tue, 02 Feb 2010 00:05:00 GMT</title>
	<link>http://docking.cis.udel.edu/about/project/news.php#235</link>
	<guid isPermaLink="true">http://docking.cis.udel.edu/about/project/news.php#235</guid>
	<description><![CDATA[Tomorrow D@H will start crossdocking, it is a critical change but we expect we will move smoothly. Please be patient in the event of possible crashes]]></description>
	<pubDate>Tue, 02 Feb 2010 00:05:00 GMT</pubDate>
</item>
<item>
	<title>Happy New Year</title>
	<link>http://docking.cis.udel.edu/about/project/news.php#234</link>
	<guid isPermaLink="true">http://docking.cis.udel.edu/about/project/news.php#234</guid>
	<description><![CDATA[This year has been exciting, we are in the last phase of testing our docking algorithms, we have now complete results for HIV1 and Trypsin, we are running p38alpha and after that we will start a crossdocking phase. Thank you to all our volunteers and happy New Year]]></description>
	<pubDate>Fri, 01 Jan 2010 16:45:00 GMT</pubDate>
</item>
<item>
	<title>Preliminary results for HIV1 phases I, II, and III</title>
	<link>http://docking.cis.udel.edu/about/project/news.php#233</link>
	<guid isPermaLink="true">http://docking.cis.udel.edu/about/project/news.php#233</guid>
	<description><![CDATA[Our preliminary results for HIV1 complexes from the 3 phases of D@H show that our algorithms are accurate and robust. If this behavior holds for the remaining tests (Trypsin and P38alpha) Docking@Home will be ready to start cross-docking new structures. Special thanks to all our volunteers, we woudn't be at this point without you.]]></description>
	<pubDate>Thu, 01 Jan 1970 00:00:00 GMT</pubDate>
</item>
<item>
	<title>D@H third phase: Trypsin</title>
	<link>http://docking.cis.udel.edu/about/project/news.php#232</link>
	<guid isPermaLink="true">http://docking.cis.udel.edu/about/project/news.php#232</guid>
	<description><![CDATA[We are starting the distribution of trypsin complexes using initial configurations that are at least 5A away from the crystal structure. With this set of experiments we expect to prove that our preprocessing algorithm can find native-like docking structures despite the initial conditions of the docking.]]></description>
	<pubDate>Mon, 19 Oct 2009 23:07:00 GMT</pubDate>
</item>
<item>
	<title>D@H third phase</title>
	<link>http://docking.cis.udel.edu/about/project/news.php#231</link>
	<guid isPermaLink="true">http://docking.cis.udel.edu/about/project/news.php#231</guid>
	<description><![CDATA[Since we started tesing HIV1 we expect that the workunits will be shorter than our previous batch. We have also detected download errors in some machines, we are investigating if this issue has something to do with the new complexes or are more a BOINC-related issue.]]></description>
	<pubDate>Mon, 24 Aug 2009 16:58:00 GMT</pubDate>
</item>
<item>
	<title>D@H third phase</title>
	<link>http://docking.cis.udel.edu/about/project/news.php#230</link>
	<guid isPermaLink="true">http://docking.cis.udel.edu/about/project/news.php#230</guid>
	<description><![CDATA[Today D@H starts its 3rd phase of validation. This time we will dock HIV1 protease, Trypsin, and P38alpha proteins using ligands with very different initial conformations than those in the crystal complexes. With these experiments we expect to prove that by combining our prostprocessing with our sampling capabilities, D@H is able to find near-native structures even if the initial conditions are not favorable.]]></description>
	<pubDate>Wed, 26 Aug 2009 16:45:00 GMT</pubDate>
</item>
<item>
	<title>D@H in Chemical & Engineering News</title>
	<link>http://docking.cis.udel.edu/about/project/news.php#229</link>
	<guid isPermaLink="true">http://docking.cis.udel.edu/about/project/news.php#229</guid>
	<description><![CDATA[ Here you can read an article  of Daniella Jaeger for Chemical & Engineering News featurning inhalable chocolate and Docking@Home.]]></description>
	<pubDate>Mon, 24 Aug 2009 17:46:00 GMT</pubDate>
</item>
<item>
	<title>New executable</title>
	<link>http://docking.cis.udel.edu/about/project/news.php#228</link>
	<guid isPermaLink="true">http://docking.cis.udel.edu/about/project/news.php#228</guid>
	<description><![CDATA[Today we are distributing a new executable. We recompiled our application with standarized flags so that Windows and Linux machines take about the same time to compute workunits; also several bugs in the graphical application have been fixed. If you encounter any problems (usually download errors) please update or reset the project in the BOINC client.]]></description>
	<pubDate>Wed, 05 Aug 2009 18:02:00 GMT</pubDate>
</item>

    </channel>
    </rss>
